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  •  cooch17
      cooch17
compiling R | x86_64 | CentOS 5.3 | lapack/blas woes
#1
Jr Board Member
Joined: 2009/1/9
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Posts: 42
Probably overly narrow question to generate much 'traffic', but here goes...

I recently upgraded my multi-Opteron machine to CentOS 5.3 (from FC 8). Went fine. A major app for me on this box is R (statistical software). Normally, I do a compile from scratch, using standard lapack and ACML BLAS. However, now matter how much fooling I've done, whenever I try to do the compilation, and run the make check, it throws a major error on some high-level matrix functions. The error method consistently points to lapack as the culprit. If I take lapack out of the compilation, then make check runs fun. Good right? Well, without lapack, several key programs take forever to run.

Anyone have any thoughts/comments/suggestions?

Thanks!
Posted on: 2009/6/26 4:36
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  •  pschaff
      pschaff
Re: compiling R | x86_64 | CentOS 5.3 | lapack/blas woes
#2
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Joined: 2006/12/13
From Tidewater, Virginia, North America
Posts: 18773
The EPEL repo has R.
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Phil

Recommended reading: FAQ & Readme first ; Search hint: google "your topic site:centos.org"; Smart Questions
Posted on: 2009/6/26 21:52
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